STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000429985_00443Unannotated protein. (580 aa)    
Predicted Functional Partners:
GCA_000429985_03083
Unannotated protein.
   
 0.997
GCA_000429985_02510
Unannotated protein.
  
 0.994
GCA_000429985_02295
Unannotated protein.
  
 0.993
GCA_000429985_02532
Unannotated protein.
  
 0.992
GCA_000429985_01394
Unannotated protein.
  
 0.991
GCA_000429985_00514
Unannotated protein.
  
 0.990
GCA_000429985_00531
Unannotated protein.
 
 0.990
GCA_000429985_00567
Unannotated protein.
  
 0.988
GCA_000429985_00646
Unannotated protein.
  
 0.886
GCA_000429985_01457
Unannotated protein.
  
 0.869
Your Current Organism:
Desulfovibrio bastinii
NCBI taxonomy Id: 1121441
Other names: D. bastinii DSM 16055, Desulfovibrio bastinii DSM 16055
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.