STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000429985_03430Unannotated protein. (578 aa)    
Predicted Functional Partners:
GCA_000429985_03303
Unannotated protein.
  
 0.983
GCA_000429985_01593
Unannotated protein.
 
 0.969
GCA_000429985_01154
Unannotated protein.
 
 0.957
GCA_000429985_01947
Unannotated protein.
 
 0.957
GCA_000429985_03051
Unannotated protein.
  
 0.956
GCA_000429985_01897
Unannotated protein.
  
 0.955
GCA_000429985_02615
Unannotated protein.
 0.950
GCA_000429985_01486
Unannotated protein.
  
 0.948
GCA_000429985_00203
Unannotated protein.
 
 0.943
GCA_000429985_02131
Unannotated protein.
  
 0.938
Your Current Organism:
Desulfovibrio bastinii
NCBI taxonomy Id: 1121441
Other names: D. bastinii DSM 16055, Desulfovibrio bastinii DSM 16055
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.