STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000711735_03033Unannotated protein. (450 aa)    
Predicted Functional Partners:
GCA_000711735_01291
Unannotated protein.
    
 0.809
GCA_000711735_03032
Unannotated protein.
  
    0.809
GCA_000711735_01204
Unannotated protein.
  
 
 0.800
GCA_000711735_00870
Unannotated protein.
  
    0.757
GCA_000711735_01509
Unannotated protein.
  
 
 0.721
GCA_000711735_01874
Unannotated protein.
  
     0.703
GCA_000711735_01565
Unannotated protein.
    
  0.692
GCA_000711735_01818
Unannotated protein.
    
  0.684
GCA_000711735_02808
Unannotated protein.
     
 0.683
GCA_000711735_03671
Unannotated protein.
     
 0.680
Your Current Organism:
Desulfovibrio frigidus
NCBI taxonomy Id: 1121447
Other names: D. frigidus DSM 17176, Desulfovibrio frigidus DSM 17176
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.