STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fdhAPutative Formate dehydrogenase subunit alpha. (1012 aa)    
Predicted Functional Partners:
fdhB
Putative Formate dehydrogenase subunit beta; Beta chain of the formate dehydrogenase (FDH) catalyzes the reversible two-electron oxidation of formate to carbon dioxide. FDH loses activity in the presence of air, but this activity can be restored. This chain is an electron transfer unit.
 
 0.999
DGI_3335
Putative Fe-S-cluster-containing hydrogenase component protein.
 
 0.996
ohcB
Putative 4Fe-4S ferredoxin iron-sulfur binding domain protein.
 
 0.990
hmcB
Putative hmc operon protein 2.
 
 0.989
DGI_2741
Putative 4Fe-4S ferredoxin iron-sulfur binding domain protein.
 
 0.984
DGI_3088
Hypothetical protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
  
 
 0.944
fdhE
Putative formate dehydrogenase accessory protein; Necessary for formate dehydrogenase activity. Belongs to the FdhE family.
 
 
 
 0.930
fdhE1
Putative formate dehydrogenase, formation protein FdhE1; Necessary for formate dehydrogenase activity. Belongs to the FdhE family.
 
 
 
 0.924
DGI_0631
Putative formylmethanofuran dehydrogenase subunit E.
  
 
 0.915
floxC
Putative 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
   
 
  0.906
Your Current Organism:
Desulfovibrio gigas
NCBI taxonomy Id: 1121448
Other names: D. gigas DSM 1382 = ATCC 19364, Desulfovibrio gigas ATCC 19364, Desulfovibrio gigas DSM 1382 = ATCC 19364
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.