STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIN70185.1Amino acid ABC transporter membrane protein 2, PAAT family. (230 aa)    
Predicted Functional Partners:
SIN70163.1
Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family.
 0.996
SIN72232.1
Amino acid ABC transporter membrane protein 1, PAAT family (TC 3.A.1.3.-).
 
0.989
SIN68927.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
 0.983
SIN87794.1
Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family.
 0.982
SIO41933.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
 0.981
SIN70150.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 0.975
SIO35052.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 0.951
SIN68902.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 0.949
SIN87833.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 0.949
SIO31734.1
Amino acid ABC transporter ATP-binding protein, PAAT family (TC 3.A.1.3.-).
 0.949
Your Current Organism:
Halodesulfovibrio marinisediminis
NCBI taxonomy Id: 1121457
Other names: Desulfovibrio marinisediminis C/L2, Desulfovibrio marinisediminis DSM 17456, Desulfovibrio marinisediminis JCM 14577, Desulfovibrio sp. C/L2, Desulfovibrio sp. JCM 14577, H. marinisediminis DSM 17456, Halodesulfovibrio marinisediminis DSM 17456, Halodesulfovibrio marinisediminis JCM 14577
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.