STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIN73346.1Uncharacterized membrane protein YdjX, TVP38/TMEM64 family, SNARE-associated domain. (224 aa)    
Predicted Functional Partners:
SIN73359.1
Glycosyltransferase involved in cell wall bisynthesis.
 
   
 0.657
SIO36848.1
Hypothetical protein.
  
     0.593
SIO29833.1
Uncharacterized membrane protein YdjX, TVP38/TMEM64 family, SNARE-associated domain.
  
     0.576
SIO36862.1
Hypothetical protein.
  
     0.561
SIN94347.1
CDP-diacylglycerol--serine O-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
    
  0.539
SIO35720.1
Phospholipid N-methyltransferase.
    
  0.536
SIN90067.1
Cardiolipin synthase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol; Belongs to the phospholipase D family. Cardiolipin synthase subfamily.
    
  0.528
psd
Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
    
  0.528
SIN90565.1
Diacylglycerol kinase (ATP); Recycling of diacylglycerol produced during the turnover of membrane phospholipid.
    
  0.498
SIO18910.1
Phosphatidate cytidylyltransferase; Belongs to the CDS family.
    
  0.497
Your Current Organism:
Halodesulfovibrio marinisediminis
NCBI taxonomy Id: 1121457
Other names: Desulfovibrio marinisediminis C/L2, Desulfovibrio marinisediminis DSM 17456, Desulfovibrio marinisediminis JCM 14577, Desulfovibrio sp. C/L2, Desulfovibrio sp. JCM 14577, H. marinisediminis DSM 17456, Halodesulfovibrio marinisediminis DSM 17456, Halodesulfovibrio marinisediminis JCM 14577
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