STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIN86965.12-oxoglutarate ferredoxin oxidoreductase subunit beta. (252 aa)    
Predicted Functional Partners:
SIN86986.1
2-oxoglutarate ferredoxin oxidoreductase, gamma subunit.
 0.999
SIN86945.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
 0.997
SIO08720.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 0.997
SIO40518.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
 
 0.996
SIN86925.1
2-oxoglutarate ferredoxin oxidoreductase subunit delta.
 
 0.993
SIN73755.1
2-oxoglutarate ferredoxin oxidoreductase, gamma subunit.
 0.982
SIN81027.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
 0.979
SIN73726.1
2-oxoglutarate ferredoxin oxidoreductase, alpha subunit.
 0.971
SIN81000.1
2-oxoglutarate ferredoxin oxidoreductase subunit gamma.
 
 0.967
SIO41072.1
Indolepyruvate ferredoxin oxidoreductase alpha subunit.
 
 0.960
Your Current Organism:
Halodesulfovibrio marinisediminis
NCBI taxonomy Id: 1121457
Other names: Desulfovibrio marinisediminis C/L2, Desulfovibrio marinisediminis DSM 17456, Desulfovibrio marinisediminis JCM 14577, Desulfovibrio sp. C/L2, Desulfovibrio sp. JCM 14577, H. marinisediminis DSM 17456, Halodesulfovibrio marinisediminis DSM 17456, Halodesulfovibrio marinisediminis JCM 14577
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.