STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000375485_02691Unannotated protein. (358 aa)    
Predicted Functional Partners:
GCA_000375485_02689
Unannotated protein.
 0.999
GCA_000375485_02688
Unannotated protein.
 
 0.998
GCA_000375485_02692
Unannotated protein.
 
 0.996
GCA_000375485_02690
Unannotated protein.
 
 
 0.980
GCA_000375485_02687
Unannotated protein.
 
  
 0.968
GCA_000375485_00754
Unannotated protein.
  
 0.964
GCA_000375485_01455
Unannotated protein.
 
 0.963
GCA_000375485_02024
Unannotated protein.
   
 0.963
GCA_000375485_01456
Unannotated protein.
  
 0.957
GCA_000375485_01458
Unannotated protein.
  
 0.954
Your Current Organism:
Desulfovibrio oxyclinae
NCBI taxonomy Id: 1121459
Other names: D. oxyclinae DSM 11498, Desulfovibrio oxyclinae DSM 11498
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.