STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000429345_00662Unannotated protein. (171 aa)    
Predicted Functional Partners:
GCA_000429345_02647
Unannotated protein.
  
     0.650
GCA_000429345_02678
Unannotated protein.
  
     0.602
GCA_000429345_03045
Unannotated protein.
  
     0.590
GCA_000429345_03132
Unannotated protein.
  
     0.508
GCA_000429345_01676
Unannotated protein.
  
     0.480
GCA_000429345_02725
Unannotated protein.
  
     0.453
GCA_000429345_02197
Unannotated protein.
  
     0.443
GCA_000429345_02089
Unannotated protein.
 
    0.437
GCA_000429345_01172
Unannotated protein.
  
     0.432
GCA_000429345_01480
Unannotated protein.
  
     0.415
Your Current Organism:
Desulfovirgula thermocuniculi
NCBI taxonomy Id: 1121468
Other names: D. thermocuniculi DSM 16036, Desulfovirgula thermocuniculi DSM 16036
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.