STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000429345_00762Unannotated protein. (115 aa)    
Predicted Functional Partners:
GCA_000429345_00629
Unannotated protein.
   
 0.981
GCA_000429345_00618
Unannotated protein.
    
 0.978
GCA_000429345_00619
Unannotated protein.
 
 0.846
GCA_000429345_00869
Unannotated protein.
 
 0.842
GCA_000429345_00109
Unannotated protein.
 
 0.804
GCA_000429345_00763
Unannotated protein.
 
  
 0.789
GCA_000429345_00503
Unannotated protein.
 
 
 0.779
GCA_000429345_00624
Unannotated protein.
 
 
 0.775
GCA_000429345_00504
Unannotated protein.
  
 0.772
GCA_000429345_00634
Unannotated protein.
    
 0.769
Your Current Organism:
Desulfovirgula thermocuniculi
NCBI taxonomy Id: 1121468
Other names: D. thermocuniculi DSM 16036, Desulfovirgula thermocuniculi DSM 16036
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.