STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000429345_00931Unannotated protein. (387 aa)    
Predicted Functional Partners:
GCA_000429345_00930
Unannotated protein.
       0.773
GCA_000429345_00932
Unannotated protein.
       0.773
GCA_000429345_00933
Unannotated protein.
 
     0.766
GCA_000429345_01519
Unannotated protein.
 
     0.761
GCA_000429345_01475
Unannotated protein.
  
     0.736
GCA_000429345_02497
Unannotated protein.
  
   
 0.704
GCA_000429345_03087
Unannotated protein.
 
     0.701
GCA_000429345_01433
Unannotated protein.
  
     0.698
GCA_000429345_02498
Unannotated protein.
  
     0.601
GCA_000429345_01542
Unannotated protein.
  
     0.589
Your Current Organism:
Desulfovirgula thermocuniculi
NCBI taxonomy Id: 1121468
Other names: D. thermocuniculi DSM 16036, Desulfovirgula thermocuniculi DSM 16036
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.