STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000429345_01312Unannotated protein. (142 aa)    
Predicted Functional Partners:
GCA_000429345_01313
Unannotated protein.
       0.726
GCA_000429345_01322
Unannotated protein.
  
    0.669
GCA_000429345_00428
Unannotated protein.
    
  0.582
GCA_000429345_00611
Unannotated protein.
  
    0.569
GCA_000429345_00967
Unannotated protein.
  
    0.569
GCA_000429345_01630
Unannotated protein.
    
 0.559
GCA_000429345_02229
Unannotated protein.
    
  0.534
GCA_000429345_01912
Unannotated protein.
    
  0.533
GCA_000429345_01311
Unannotated protein.
       0.493
GCA_000429345_02689
Unannotated protein.
       0.457
Your Current Organism:
Desulfovirgula thermocuniculi
NCBI taxonomy Id: 1121468
Other names: D. thermocuniculi DSM 16036, Desulfovirgula thermocuniculi DSM 16036
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.