STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000429345_01313Unannotated protein. (203 aa)    
Predicted Functional Partners:
GCA_000429345_02486
Unannotated protein.
  
 
 0.890
GCA_000429345_02233
Unannotated protein.
  
  
 0.799
GCA_000429345_02689
Unannotated protein.
  
 
 0.752
GCA_000429345_00820
Unannotated protein.
 
 
0.748
GCA_000429345_01312
Unannotated protein.
       0.726
GCA_000429345_02679
Unannotated protein.
 
    0.715
GCA_000429345_02688
Unannotated protein.
   
  
 0.706
GCA_000429345_01177
Unannotated protein.
     
 0.703
GCA_000429345_01487
Unannotated protein.
    
   0.703
GCA_000429345_02560
Unannotated protein.
  
 
 0.665
Your Current Organism:
Desulfovirgula thermocuniculi
NCBI taxonomy Id: 1121468
Other names: D. thermocuniculi DSM 16036, Desulfovirgula thermocuniculi DSM 16036
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.