STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000429345_02034Unannotated protein. (349 aa)    
Predicted Functional Partners:
GCA_000429345_01963
Unannotated protein.
 
 0.984
GCA_000429345_01018
Unannotated protein.
     
 0.890
GCA_000429345_02035
Unannotated protein.
  
  
 0.834
GCA_000429345_01967
Unannotated protein.
  
  
  0.736
GCA_000429345_01187
Unannotated protein.
   
 
 0.729
GCA_000429345_01300
Unannotated protein.
     
 0.664
GCA_000429345_00918
Unannotated protein.
   
 
 0.623
GCA_000429345_01309
Unannotated protein.
    
 0.564
GCA_000429345_02033
Unannotated protein.
       0.508
GCA_000429345_00899
Unannotated protein.
  
  
 0.489
Your Current Organism:
Desulfovirgula thermocuniculi
NCBI taxonomy Id: 1121468
Other names: D. thermocuniculi DSM 16036, Desulfovirgula thermocuniculi DSM 16036
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.