STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000429345_02553Unannotated protein. (438 aa)    
Predicted Functional Partners:
GCA_000429345_02551
Unannotated protein.
  
 0.991
GCA_000429345_01160
Unannotated protein.
  
 0.979
GCA_000429345_02554
Unannotated protein.
 
    0.966
GCA_000429345_02552
Unannotated protein.
       0.836
GCA_000429345_01140
Unannotated protein.
 
  
 0.827
GCA_000429345_01901
Unannotated protein.
 
   
 0.649
GCA_000429345_00490
Unannotated protein.
 
  
 0.632
GCA_000429345_00003
Unannotated protein.
   
    0.626
GCA_000429345_02577
Unannotated protein.
   
    0.626
GCA_000429345_02815
Unannotated protein.
   
    0.626
Your Current Organism:
Desulfovirgula thermocuniculi
NCBI taxonomy Id: 1121468
Other names: D. thermocuniculi DSM 16036, Desulfovirgula thermocuniculi DSM 16036
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.