STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000429345_03054Unannotated protein. (558 aa)    
Predicted Functional Partners:
GCA_000429345_03058
Unannotated protein.
 
 0.982
GCA_000429345_00274
Unannotated protein.
 
 0.967
GCA_000429345_01700
Unannotated protein.
 
 0.961
GCA_000429345_01699
Unannotated protein.
 
 0.923
GCA_000429345_03057
Unannotated protein.
  
 0.898
GCA_000429345_00277
Unannotated protein.
 
 
 0.894
GCA_000429345_00264
Unannotated protein.
 
 
 0.893
GCA_000429345_00263
Unannotated protein.
  
 
 0.886
GCA_000429345_00273
Unannotated protein.
 
 0.882
GCA_000429345_00270
Unannotated protein.
 
 0.872
Your Current Organism:
Desulfovirgula thermocuniculi
NCBI taxonomy Id: 1121468
Other names: D. thermocuniculi DSM 16036, Desulfovirgula thermocuniculi DSM 16036
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.