STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000376385_00482Unannotated protein. (238 aa)    
Predicted Functional Partners:
GCA_000376385_00172
Unannotated protein.
     0.922
GCA_000376385_00476
Unannotated protein.
    
  0.885
GCA_000376385_02448
Unannotated protein.
 
 
 0.796
GCA_000376385_00483
Unannotated protein.
       0.762
GCA_000376385_00475
Unannotated protein.
  
 
 0.665
GCA_000376385_01929
Unannotated protein.
   
    0.662
GCA_000376385_00480
Unannotated protein.
       0.649
GCA_000376385_00481
Unannotated protein.
       0.649
GCA_000376385_00474
Unannotated protein.
  
 
 0.646
GCA_000376385_00471
Unannotated protein.
  
 
 0.634
Your Current Organism:
Desulfurispora thermophila
NCBI taxonomy Id: 1121472
Other names: D. thermophila DSM 16022, Desulfurispora thermophila DSM 16022
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.