STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ17529.12-oxoglutarate ferredoxin oxidoreductase subunit delta. (71 aa)    
Predicted Functional Partners:
SHJ52495.1
NADH-quinone oxidoreductase subunit F.
  
 0.997
SHJ59492.1
Formate dehydrogenase major subunit/NADH-quinone oxidoreductase subunit G.
  
 0.977
SHJ71535.1
Formate dehydrogenase major subunit/NADH-quinone oxidoreductase subunit G.
  
 0.977
SHJ17496.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
 
 0.976
SHJ17437.1
2-oxoglutarate ferredoxin oxidoreductase subunit gamma.
 
 0.974
SHJ17468.1
2-oxoglutarate ferredoxin oxidoreductase subunit beta.
 
 0.973
SHJ51136.1
NADH-quinone oxidoreductase subunit F.
  
 0.971
SHI36883.1
NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein.
  
 0.969
SHJ42988.1
NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein.
  
 0.969
SHJ94738.1
Respiratory-chain NADH dehydrogenase subunit.
  
 0.968
Your Current Organism:
Dethiosulfatibacter aminovorans
NCBI taxonomy Id: 1121476
Other names: D. aminovorans DSM 17477, Dethiosulfatibacter aminovorans DSM 17477
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