STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ31645.1Predicted protein. (871 aa)    
Predicted Functional Partners:
SHJ31621.1
5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.
       0.723
SHI41354.1
Copper amine oxidase N-terminal domain-containing protein.
  
     0.702
SHJ29200.1
Copper amine oxidase N-terminal domain-containing protein.
  
     0.695
SHJ42723.1
S-layer homology domain-containing protein.
  
     0.680
SHJ31677.1
tRNA(Ile)-lysidine synthase TilS/MesJ; Belongs to the TtcA family.
       0.676
SHJ42753.1
S-layer homology domain-containing protein.
  
     0.671
SHJ60857.1
S-layer homology domain-containing protein.
 
     0.664
SHI66462.1
Hypothetical protein.
  
     0.647
SHJ48909.1
S-layer homology domain-containing protein.
  
     0.641
SHJ31791.1
S-layer homology domain-containing protein.
  
     0.640
Your Current Organism:
Dethiosulfatibacter aminovorans
NCBI taxonomy Id: 1121476
Other names: D. aminovorans DSM 17477, Dethiosulfatibacter aminovorans DSM 17477
Server load: low (26%) [HD]