STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF83993.1Cupin domain protein. (165 aa)    
Predicted Functional Partners:
SHF84021.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
 
     0.860
SHF83934.1
Putative tricarboxylic transport membrane protein.
 
     0.855
SHF83905.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
 
     0.719
SHF83956.1
TctA family transporter.
  
    0.684
SHF83851.1
Regulator of RNase E activity RraA.
 
     0.673
SHF83877.1
DNA-binding transcriptional regulator, FadR family.
  
    0.650
SHF83821.1
4-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family.
 
 
   0.571
SHF75605.1
Hypothetical protein.
  
     0.557
SHF38031.1
Two-component system, OmpR family, sensor histidine kinase TctE.
  
     0.508
SHF75572.1
Hypothetical protein.
  
    0.459
Your Current Organism:
Devosia limi
NCBI taxonomy Id: 1121477
Other names: D. limi DSM 17137, Devosia limi DSM 17137
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.