STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000429365_00003Unannotated protein. (93 aa)    
Predicted Functional Partners:
GCA_000429365_00004
Unannotated protein.
 
 0.999
GCA_000429365_02258
Unannotated protein.
 
 0.998
GCA_000429365_03109
Unannotated protein.
 
 0.996
GCA_000429365_00005
Unannotated protein.
 
 0.995
GCA_000429365_03041
Unannotated protein.
 
 0.995
GCA_000429365_03037
Unannotated protein.
  
 0.986
GCA_000429365_00002
Unannotated protein.
 
  0.975
GCA_000429365_03108
Unannotated protein.
 
 0.960
GCA_000429365_02260
Unannotated protein.
 
  0.894
GCA_000429365_03111
Unannotated protein.
 
  0.894
Your Current Organism:
Pseudodonghicola xiamenensis
NCBI taxonomy Id: 1121479
Other names: Donghicola xiamenensis DSM 18339, P. xiamenensis DSM 18339, Pseudodonghicola xiamenensis DSM 18339
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.