STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000429365_01672Unannotated protein. (274 aa)    
Predicted Functional Partners:
GCA_000429365_00448
Unannotated protein.
 
 
 0.996
GCA_000429365_00067
Unannotated protein.
 
   
 0.915
GCA_000429365_00400
Unannotated protein.
 
   
 0.914
GCA_000429365_00963
Unannotated protein.
 
   
 0.912
GCA_000429365_01140
Unannotated protein.
 
   
 0.846
GCA_000429365_01673
Unannotated protein.
       0.845
GCA_000429365_01674
Unannotated protein.
     
 0.791
GCA_000429365_00151
Unannotated protein.
   
    0.750
GCA_000429365_00325
Unannotated protein.
    
 0.659
GCA_000429365_01903
Unannotated protein.
   
    0.594
Your Current Organism:
Pseudodonghicola xiamenensis
NCBI taxonomy Id: 1121479
Other names: Donghicola xiamenensis DSM 18339, P. xiamenensis DSM 18339, Pseudodonghicola xiamenensis DSM 18339
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.