STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000429365_02908Unannotated protein. (649 aa)    
Predicted Functional Partners:
GCA_000429365_01088
Unannotated protein.
  
  
 0.882
GCA_000429365_02689
Unannotated protein.
 
 
 0.863
GCA_000429365_02536
Unannotated protein.
  
    0.853
GCA_000429365_00856
Unannotated protein.
  
    0.844
GCA_000429365_01009
Unannotated protein.
  
    0.837
GCA_000429365_02408
Unannotated protein.
  
    0.837
GCA_000429365_03928
Unannotated protein.
  
    0.837
GCA_000429365_01358
Unannotated protein.
  
 
 0.823
GCA_000429365_01673
Unannotated protein.
 
 
 0.820
GCA_000429365_00386
Unannotated protein.
  
 
 0.790
Your Current Organism:
Pseudodonghicola xiamenensis
NCBI taxonomy Id: 1121479
Other names: Donghicola xiamenensis DSM 18339, P. xiamenensis DSM 18339, Pseudodonghicola xiamenensis DSM 18339
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.