STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000429365_03561Unannotated protein. (216 aa)    
Predicted Functional Partners:
GCA_000429365_00525
Unannotated protein.
    
 0.964
GCA_000429365_02370
Unannotated protein.
    
 0.964
GCA_000429365_01220
Unannotated protein.
 
 
 0.863
GCA_000429365_02496
Unannotated protein.
   
  
 0.807
GCA_000429365_03562
Unannotated protein.
 
     0.721
GCA_000429365_03601
Unannotated protein.
 
 
 0.658
GCA_000429365_01551
Unannotated protein.
  
     0.560
GCA_000429365_04256
Unannotated protein.
  
  
  0.554
GCA_000429365_03563
Unannotated protein.
       0.531
GCA_000429365_03564
Unannotated protein.
       0.530
Your Current Organism:
Pseudodonghicola xiamenensis
NCBI taxonomy Id: 1121479
Other names: Donghicola xiamenensis DSM 18339, P. xiamenensis DSM 18339, Pseudodonghicola xiamenensis DSM 18339
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.