STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000428845_03610Unannotated protein. (169 aa)    
Predicted Functional Partners:
GCA_000428845_03608
Unannotated protein.
 
     0.808
GCA_000428845_03609
Unannotated protein.
       0.791
GCA_000428845_01105
Unannotated protein.
  
     0.769
GCA_000428845_04544
Unannotated protein.
  
     0.765
GCA_000428845_01311
Unannotated protein.
  
     0.764
GCA_000428845_03403
Unannotated protein.
  
     0.764
GCA_000428845_00234
Unannotated protein.
  
     0.763
GCA_000428845_04790
Unannotated protein.
  
     0.753
GCA_000428845_00927
Unannotated protein.
  
     0.751
GCA_000428845_02312
Unannotated protein.
  
     0.733
Your Current Organism:
Dyadobacter alkalitolerans
NCBI taxonomy Id: 1121481
Other names: D. alkalitolerans DSM 23607, Dyadobacter alkalitolerans DSM 23607
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.