STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000382205_01952Unannotated protein. (281 aa)    
Predicted Functional Partners:
GCA_000382205_01951
Unannotated protein.
 
     0.820
GCA_000382205_02108
Unannotated protein.
 
 
  0.809
GCA_000382205_01708
Unannotated protein.
 
 
  0.792
GCA_000382205_01950
Unannotated protein.
 
     0.750
GCA_000382205_02106
Unannotated protein.
 
     0.626
GCA_000382205_03020
Unannotated protein.
 
     0.621
GCA_000382205_01456
Unannotated protein.
  
 
  0.595
GCA_000382205_00096
Unannotated protein.
  
 
  0.594
GCA_000382205_04409
Unannotated protein.
  
 
  0.585
GCA_000382205_00137
Unannotated protein.
   
 
  0.571
Your Current Organism:
Dyadobacter beijingensis
NCBI taxonomy Id: 1121482
Other names: D. beijingensis DSM 21582, Dyadobacter beijingensis DSM 21582
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.