STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000378465_00673Unannotated protein. (588 aa)    
Predicted Functional Partners:
GCA_000378465_02614
Unannotated protein.
  
 
 0.871
GCA_000378465_00674
Unannotated protein.
 
     0.858
GCA_000378465_00676
Unannotated protein.
       0.777
GCA_000378465_00675
Unannotated protein.
  
    0.775
GCA_000378465_00672
Unannotated protein.
       0.752
GCA_000378465_00671
Unannotated protein.
       0.728
GCA_000378465_03806
Unannotated protein.
  
 
 0.665
GCA_000378465_00650
Unannotated protein.
   
 0.612
GCA_000378465_00565
Unannotated protein.
    
 0.596
GCA_000378465_00520
Unannotated protein.
   
 
 0.592
Your Current Organism:
Elioraea tepidiphila
NCBI taxonomy Id: 1121861
Other names: E. tepidiphila DSM 17972, Elioraea tepidiphila DSM 17972, Elioraea tepidiphila TU-7
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.