STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000378465_01455Unannotated protein. (538 aa)    
Predicted Functional Partners:
GCA_000378465_01453
Unannotated protein.
 
  0.957
GCA_000378465_01454
Unannotated protein.
  0.956
GCA_000378465_03296
Unannotated protein.
   
 
  0.905
GCA_000378465_00138
Unannotated protein.
  
  
 
0.892
GCA_000378465_00568
Unannotated protein.
  
  
 
0.891
GCA_000378465_00117
Unannotated protein.
  
  
 
0.881
GCA_000378465_00118
Unannotated protein.
  
  
 
0.880
GCA_000378465_03740
Unannotated protein.
  
  
 
0.877
GCA_000378465_03710
Unannotated protein.
  
  
 
0.873
GCA_000378465_03575
Unannotated protein.
  
  
 
0.869
Your Current Organism:
Elioraea tepidiphila
NCBI taxonomy Id: 1121861
Other names: E. tepidiphila DSM 17972, Elioraea tepidiphila DSM 17972, Elioraea tepidiphila TU-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.