STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000378465_01930Unannotated protein. (334 aa)    
Predicted Functional Partners:
GCA_000378465_01931
Unannotated protein.
 
     0.801
GCA_000378465_00796
Unannotated protein.
  
 
 0.564
GCA_000378465_01932
Unannotated protein.
       0.559
GCA_000378465_01929
Unannotated protein.
       0.548
GCA_000378465_00081
Unannotated protein.
 
    0.545
GCA_000378465_01926
Unannotated protein.
       0.541
GCA_000378465_01927
Unannotated protein.
       0.541
GCA_000378465_01928
Unannotated protein.
       0.541
GCA_000378465_03243
Unannotated protein.
   
 
 0.507
GCA_000378465_00575
Unannotated protein.
   
    0.491
Your Current Organism:
Elioraea tepidiphila
NCBI taxonomy Id: 1121861
Other names: E. tepidiphila DSM 17972, Elioraea tepidiphila DSM 17972, Elioraea tepidiphila TU-7
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.