STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000378465_03026Unannotated protein. (280 aa)    
Predicted Functional Partners:
GCA_000378465_03027
Unannotated protein.
 
0.993
GCA_000378465_03025
Unannotated protein.
  0.977
GCA_000378465_01288
Unannotated protein.
 
 
0.971
GCA_000378465_01936
Unannotated protein.
 
0.967
GCA_000378465_03024
Unannotated protein.
 
 
  0.967
GCA_000378465_01628
Unannotated protein.
 
  0.950
GCA_000378465_02921
Unannotated protein.
 
 
0.935
GCA_000378465_02818
Unannotated protein.
 
 
0.930
GCA_000378465_01629
Unannotated protein.
  0.929
GCA_000378465_02816
Unannotated protein.
  0.928
Your Current Organism:
Elioraea tepidiphila
NCBI taxonomy Id: 1121861
Other names: E. tepidiphila DSM 17972, Elioraea tepidiphila DSM 17972, Elioraea tepidiphila TU-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.