STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000378465_03107Unannotated protein. (322 aa)    
Predicted Functional Partners:
GCA_000378465_03108
Unannotated protein.
 
     0.865
GCA_000378465_03106
Unannotated protein.
       0.669
GCA_000378465_03109
Unannotated protein.
       0.538
GCA_000378465_03112
Unannotated protein.
 
     0.532
GCA_000378465_03105
Unannotated protein.
       0.458
GCA_000378465_01268
Unannotated protein.
  
     0.426
GCA_000378465_03113
Unannotated protein.
       0.424
GCA_000378465_03110
Unannotated protein.
       0.418
GCA_000378465_03111
Unannotated protein.
       0.404
Your Current Organism:
Elioraea tepidiphila
NCBI taxonomy Id: 1121861
Other names: E. tepidiphila DSM 17972, Elioraea tepidiphila DSM 17972, Elioraea tepidiphila TU-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.