STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000378465_03208Unannotated protein. (150 aa)    
Predicted Functional Partners:
GCA_000378465_01868
Unannotated protein.
   
    0.801
GCA_000378465_02791
Unannotated protein.
  
 
  0.770
GCA_000378465_03691
Unannotated protein.
    
 0.760
GCA_000378465_03206
Unannotated protein.
 
     0.747
GCA_000378465_00014
Unannotated protein.
 
 
 0.708
GCA_000378465_03207
Unannotated protein.
       0.686
GCA_000378465_00979
Unannotated protein.
    
 0.657
GCA_000378465_01830
Unannotated protein.
      0.616
GCA_000378465_01904
Unannotated protein.
    
  0.605
GCA_000378465_03633
Unannotated protein.
    
  0.605
Your Current Organism:
Elioraea tepidiphila
NCBI taxonomy Id: 1121861
Other names: E. tepidiphila DSM 17972, Elioraea tepidiphila DSM 17972, Elioraea tepidiphila TU-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.