STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lacDTagatose 1,6-diphosphate aldolase 2; Belongs to the aldolase LacD family. (324 aa)    
Predicted Functional Partners:
OMW_01386
Tagatose-6-phosphate kinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
 
 
 0.998
OMW_01388
Galactose-6-phosphate isomerase, LacA subunit.
 
  
 0.971
lacB
Galactose-6-phosphate isomerase subunit lacB.
 
  
 0.940
pfkA
6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.
    
 0.899
OMW_01395
PTS system, lactose-specific IIC component.
 
  
 0.835
OMW_00789
1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
  
 
 0.790
OMW_01397
6-phospho-beta-galactosidase.
 
  
 0.749
OMW_00590
Hypothetical protein.
  
 
  0.716
OMW_00210
6-phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
  
  
 0.600
OMW_02215
Hypothetical protein; Belongs to the glycosyl hydrolase 1 family.
  
  
 0.600
Your Current Organism:
Enterococcus columbae
NCBI taxonomy Id: 1121865
Other names: E. columbae DSM 7374 = ATCC 51263, Enterococcus columbae ATCC 51263, Enterococcus columbae ATCC 51263 = DMS 7374, Enterococcus columbae CCUG 27894, Enterococcus columbae CIP 103675, Enterococcus columbae DSM 7374, Enterococcus columbae DSM 7374 = ATCC 51263, Enterococcus columbae EnGen0384, Enterococcus columbae LMG 11740, Enterococcus columbae NBRC 100677, Enterococcus columbae NCFB 13013, Enterococcus columbae NCIMB 13013, Enterococcus columbae STR 345
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