STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FEAC_01840Hypothetical protein. (326 aa)    
Predicted Functional Partners:
FEAC_01830
Hypothetical protein.
       0.773
rshA
Anti-sigma factor RshA.
  
     0.717
FEAC_00260
acyl-ACP thioesterase.
  
     0.678
FEAC_01800
Putative transposase.
       0.668
FEAC_01810
Hypothetical protein.
       0.668
FEAC_01820
Hypothetical protein.
       0.668
epsE2
Putative glycosyltransferase EpsE.
  
 
 0.502
FEAC_01130
HhH-GPD superfamily base excision DNA repair protein.
 
     0.501
FEAC_14990
Major facilitator superfamily protein.
  
     0.483
FEAC_01850
Protoporphyrinogen oxidase.
       0.452
Your Current Organism:
Ferrimicrobium acidiphilum
NCBI taxonomy Id: 1121877
Other names: F. acidiphilum DSM 19497, Ferrimicrobium acidiphilum DSM 19497
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.