FEAC_04340 protein (Ferrimicrobium acidiphilum)

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Score

FEAC_04340

HhH-GPD superfamily base excision DNA repair protein. (192 aa)

Predicted Functional Partners:

alkA

0.860

xthA

0.751

polA

0.582

FEAC_04330

0.537

gph

0.514

nfo

0.426

recA

0.404

Your Current Organism:

Ferrimicrobium acidiphilum

NCBI taxonomy Id: 1121877
Other names: F. acidiphilum DSM 19497, Ferrimicrobium acidiphilum DSM 19497

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FEAC_04330	FEAC_04340	FEAC_04330	FEAC_04340	Hypothetical protein.	HhH-GPD superfamily base excision DNA repair protein.	0.537
FEAC_04340	FEAC_04330	FEAC_04340	FEAC_04330	HhH-GPD superfamily base excision DNA repair protein.	Hypothetical protein.	0.537
FEAC_04340	alkA	FEAC_04340	FEAC_24020	HhH-GPD superfamily base excision DNA repair protein.	DNA-3-methyladenine glycosylase 2.	0.860
FEAC_04340	gph	FEAC_04340	FEAC_02570	HhH-GPD superfamily base excision DNA repair protein.	Phosphoglycolate phosphatase.	0.514
FEAC_04340	nfo	FEAC_04340	FEAC_02550	HhH-GPD superfamily base excision DNA repair protein.	Putative endonuclease 4; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin.	0.426
FEAC_04340	polA	FEAC_04340	FEAC_23130	HhH-GPD superfamily base excision DNA repair protein.	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	0.582
FEAC_04340	recA	FEAC_04340	FEAC_08410	HhH-GPD superfamily base excision DNA repair protein.	Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.	0.404
FEAC_04340	xthA	FEAC_04340	FEAC_24720	HhH-GPD superfamily base excision DNA repair protein.	Exodeoxyribonuclease III.	0.751
alkA	FEAC_04340	FEAC_24020	FEAC_04340	DNA-3-methyladenine glycosylase 2.	HhH-GPD superfamily base excision DNA repair protein.	0.860
alkA	gph	FEAC_24020	FEAC_02570	DNA-3-methyladenine glycosylase 2.	Phosphoglycolate phosphatase.	0.712
alkA	nfo	FEAC_24020	FEAC_02550	DNA-3-methyladenine glycosylase 2.	Putative endonuclease 4; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin.	0.438
alkA	polA	FEAC_24020	FEAC_23130	DNA-3-methyladenine glycosylase 2.	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	0.780
alkA	recA	FEAC_24020	FEAC_08410	DNA-3-methyladenine glycosylase 2.	Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.	0.701
alkA	xthA	FEAC_24020	FEAC_24720	DNA-3-methyladenine glycosylase 2.	Exodeoxyribonuclease III.	0.902
gph	FEAC_04340	FEAC_02570	FEAC_04340	Phosphoglycolate phosphatase.	HhH-GPD superfamily base excision DNA repair protein.	0.514
gph	alkA	FEAC_02570	FEAC_24020	Phosphoglycolate phosphatase.	DNA-3-methyladenine glycosylase 2.	0.712
nfo	FEAC_04340	FEAC_02550	FEAC_04340	Putative endonuclease 4; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin.	HhH-GPD superfamily base excision DNA repair protein.	0.426
nfo	alkA	FEAC_02550	FEAC_24020	Putative endonuclease 4; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin.	DNA-3-methyladenine glycosylase 2.	0.438
nfo	polA	FEAC_02550	FEAC_23130	Putative endonuclease 4; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin.	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	0.586
nfo	xthA	FEAC_02550	FEAC_24720	Putative endonuclease 4; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin.	Exodeoxyribonuclease III.	0.962