STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FEAC_08340Putative pterin-4-alpha-carbinolamine dehydratase. (84 aa)    
Predicted Functional Partners:
benC
Benzoate 1,2-dioxygenase electron transfer component.
   
 
 0.587
nfrA2
FMN reductase [NAD(P)H].
   
 
  0.537
bluB
5,6-dimethylbenzimidazole synthase.
   
 
  0.537
folK
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase.
       0.430
fabG11
3-oxoacyl-[acyl-carrier-protein] reductase FabG1.
  
 
  0.417
mcpA
Methyl-accepting chemotaxis protein McpA.
       0.416
fabG2
3-oxoacyl-[acyl-carrier-protein] reductase FabG.
  
 
  0.409
fabG6
3-oxoacyl-[acyl-carrier-protein] reductase FabG.
  
 
  0.409
fabG7
3-oxoacyl-[acyl-carrier-protein] reductase FabG.
  
 
  0.401
Your Current Organism:
Ferrimicrobium acidiphilum
NCBI taxonomy Id: 1121877
Other names: F. acidiphilum DSM 19497, Ferrimicrobium acidiphilum DSM 19497
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.