STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FEAC_13490HDOD domain protein. (222 aa)    
Predicted Functional Partners:
yfiN
Putative diguanylate cyclase YfiN.
   
   0.800
lcfB1
long-chain-fatty-acid--CoA ligase.
       0.741
FEAC_13510
Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
       0.541
FEAC_24240
Blue-light-activated protein.
   
  0.495
fliD
Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
 
     0.464
gmr6
Cyclic di-GMP phosphodiesterase Gmr.
   
   0.439
cph25
Phytochrome-like protein cph2.
   
   0.439
rpfG
Cyclic di-GMP phosphodiesterase response regulator RpfG.
   
  0.436
FEAC_16740
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
 
     0.405
Your Current Organism:
Ferrimicrobium acidiphilum
NCBI taxonomy Id: 1121877
Other names: F. acidiphilum DSM 19497, Ferrimicrobium acidiphilum DSM 19497
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.