STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FEAC_14930Hypothetical protein; Phosphate-specific transport system accessory protein PhoU homolog. (218 aa)    
Predicted Functional Partners:
FEAC_05050
Hypothetical protein.
  
 
 0.773
senX3
Signal-transduction histidine kinase senX3.
 
   
 0.677
gltB1
Glutamate synthase [NADPH] large chain.
      
 0.536
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
       0.510
FEAC_14920
Putative short-chain type dehydrogenase/reductase.
   
   0.475
pheT
phenylalanine--tRNA ligase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
     
 0.459
sipT
Signal peptidase I T; Belongs to the peptidase S26 family.
  
    0.446
FEAC_27370
Epimerase family protein.
   
    0.429
gppA
Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase.
     
 0.405
ppk
Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.
     
 0.405
Your Current Organism:
Ferrimicrobium acidiphilum
NCBI taxonomy Id: 1121877
Other names: F. acidiphilum DSM 19497, Ferrimicrobium acidiphilum DSM 19497
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.