STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
madAacetyl-S-ACP:malonate ACP transferase. (582 aa)    
Predicted Functional Partners:
madC
malonyl-S-ACP:biotin-protein carboxyltransferase MADC.
 
 0.998
mdcC
Malonate decarboxylase acyl carrier protein.
 
 
 0.985
citG
2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase.
  
 0.983
fabD
Malonyl CoA-acyl carrier protein transacylase.
 
 
  0.935
mdcG
phosphoribosyl-dephospho-CoA transferase.
 
  
 0.915
pksH
Putative polyketide biosynthesis enoyl-CoA hydratase PksH.
    
  0.804
baeC
Polyketide biosynthesis malonyl CoA-acyl carrier protein transacylase BaeC.
  
 
  0.628
gltC2
HTH-type transcriptional regulator GltC; Belongs to the LysR transcriptional regulatory family.
       0.567
accD51
Putative propionyl-CoA carboxylase beta chain 5.
    
  0.495
accD52
Putative propionyl-CoA carboxylase beta chain 5.
    
  0.495
Your Current Organism:
Ferrimicrobium acidiphilum
NCBI taxonomy Id: 1121877
Other names: F. acidiphilum DSM 19497, Ferrimicrobium acidiphilum DSM 19497
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.