STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FEAC_26230Hypothetical protein. (199 aa)    
Predicted Functional Partners:
FEAC_11940
Hypothetical protein.
   
   0.904
gltB1
Glutamate synthase [NADPH] large chain.
    
  0.885
metH
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
  0.880
cinA
Putative competence-damage inducible protein; Belongs to the CinA family.
  
 
  0.860
guaA
GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP.
    
  0.845
FEAC_11490
Succinate dehydrogenase/fumarate reductase iron-sulfur subunit.
   
 
  0.802
cdr2
Coenzyme A disulfide reductase.
    
  0.718
FEAC_26240
Hypothetical protein.
       0.547
FEAC_05060
Putative oxidoreductase/MSMEI_1564.
    
  0.541
aioB
Arsenite oxidase subunit AioB precursor.
    
  0.541
Your Current Organism:
Ferrimicrobium acidiphilum
NCBI taxonomy Id: 1121877
Other names: F. acidiphilum DSM 19497, Ferrimicrobium acidiphilum DSM 19497
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.