STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FEAC_27420Hypothetical protein. (126 aa)    
Predicted Functional Partners:
ftsH2
ATP-dependent zinc metalloprotease FtsH.
 
     0.839
FEAC_27600
Phage-like baseplate assembly protein.
 
   
 0.818
FEAC_27470
Cna protein B-type domain protein.
 
     0.792
FEAC_27610
LysM domain protein.
 
     0.791
FEAC_27460
Cna protein B-type domain protein.
 
     0.784
FEAC_09180
25-like lysozyme.
 
    0.779
FEAC_28460
Phage tail sheath protein.
 
    0.776
FEAC_09140
Hypothetical protein.
 
     0.766
FEAC_09200
Phage tail protein (tail_P2_I).
 
    0.765
FEAC_09190
Baseplate J-like protein.
 
     0.751
Your Current Organism:
Ferrimicrobium acidiphilum
NCBI taxonomy Id: 1121877
Other names: F. acidiphilum DSM 19497, Ferrimicrobium acidiphilum DSM 19497
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.