STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
osmCPeroxiredoxin OsmC. (143 aa)    
Predicted Functional Partners:
addB
ATP-dependent helicase/deoxyribonuclease subunit B.
   
    0.518
FEAC_27610
LysM domain protein.
   
    0.455
otsA
Alpha,alpha-trehalose-phosphate synthase [UDP-forming].
   
    0.453
FEAC_25110
Ribonuclease BN/unknown domain fusion protein.
  
    0.453
devS
Redox sensor histidine kinase response regulator DevS.
   
    0.446
gmr1
Cyclic di-GMP phosphodiesterase Gmr.
   
    0.446
dosP
Oxygen sensor protein DosP.
   
    0.446
dosC
Diguanylate cyclase DosC.
   
    0.446
FEAC_27820
ANTAR domain protein.
   
    0.446
otsB
Trehalose-6-phosphate phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
   
    0.430
Your Current Organism:
Ferrimicrobium acidiphilum
NCBI taxonomy Id: 1121877
Other names: F. acidiphilum DSM 19497, Ferrimicrobium acidiphilum DSM 19497
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.