STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000422665_00971Unannotated protein. (885 aa)    
Predicted Functional Partners:
GCA_000422665_03183
Unannotated protein.
   
 
 0.983
GCA_000422665_01739
Unannotated protein.
  
 0.976
GCA_000422665_02055
Unannotated protein.
  
 0.976
GCA_000422665_02559
Unannotated protein.
  
 0.976
GCA_000422665_01872
Unannotated protein.
  
 
 0.973
GCA_000422665_01624
Unannotated protein.
  
  
 0.907
GCA_000422665_03302
Unannotated protein.
   
 
 0.836
GCA_000422665_00981
Unannotated protein.
  
 0.800
GCA_000422665_02599
Unannotated protein.
 
 0.781
GCA_000422665_03210
Unannotated protein.
  
 0.769
Your Current Organism:
Ferrimonas senticii
NCBI taxonomy Id: 1121880
Other names: F. senticii DSM 18821, Ferrimonas senticii DSM 18821
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.