STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000422665_01412Unannotated protein. (146 aa)    
Predicted Functional Partners:
GCA_000422665_01411
Unannotated protein.
 
    
0.814
GCA_000422665_01410
Unannotated protein.
       0.781
GCA_000422665_01413
Unannotated protein.
       0.776
GCA_000422665_01414
Unannotated protein.
       0.560
GCA_000422665_02408
Unannotated protein.
  
    0.559
GCA_000422665_00456
Unannotated protein.
  
    0.557
GCA_000422665_00409
Unannotated protein.
  
    0.548
GCA_000422665_01409
Unannotated protein.
       0.535
GCA_000422665_01415
Unannotated protein.
       0.454
GCA_000422665_00271
Unannotated protein.
  
     0.409
Your Current Organism:
Ferrimonas senticii
NCBI taxonomy Id: 1121880
Other names: F. senticii DSM 18821, Ferrimonas senticii DSM 18821
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.