STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000422665_02110Unannotated protein. (508 aa)    
Predicted Functional Partners:
GCA_000422665_00537
Unannotated protein.
    
  0.821
GCA_000422665_02020
Unannotated protein.
     
 0.808
GCA_000422665_00911
Unannotated protein.
  
 0.804
GCA_000422665_02485
Unannotated protein.
  
  
  0.771
GCA_000422665_03369
Unannotated protein.
  
  
  0.762
GCA_000422665_01374
Unannotated protein.
  
  
  0.751
GCA_000422665_02109
Unannotated protein.
       0.693
GCA_000422665_01237
Unannotated protein.
    
  0.688
GCA_000422665_01913
Unannotated protein.
    
  0.688
GCA_000422665_01961
Unannotated protein.
  
  
 0.602
Your Current Organism:
Ferrimonas senticii
NCBI taxonomy Id: 1121880
Other names: F. senticii DSM 18821, Ferrimonas senticii DSM 18821
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.