STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHE62086.1methylmalonyl-CoA epimerase. (141 aa)    
Predicted Functional Partners:
SHE36468.1
methylmalonyl-CoA mutase, C-terminal domain.
  
 0.992
SHE42430.1
(R)-ethylmalonyl-CoA mutase.
  
 0.952
SHE64589.1
methylmalonyl-CoA mutase.
 
  
 0.950
icmF
methylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly.
  
 
 0.939
SHE97774.1
LAO/AO transport system kinase.
    0.920
SHE63131.1
Phenol hydroxylase P5 protein.
   
 
 0.869
SHE42350.1
propionyl-CoA carboxylase beta chain.
 
 
 0.863
SHE62046.1
crotonyl-CoA carboxylase/reductase.
   
  0.859
SHE68439.1
Acetyl-CoA carboxylase, carboxyltransferase component.
 
 
 0.844
SHE64519.1
acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein.
  
 
 0.756
Your Current Organism:
Ferrithrix thermotolerans
NCBI taxonomy Id: 1121881
Other names: F. thermotolerans DSM 19514, Ferrithrix thermotolerans DSM 19514
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