STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHE82785.1Diguanylate cyclase (GGDEF) domain-containing protein. (860 aa)    
Predicted Functional Partners:
SHE31859.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 
0.998
SHE96322.1
EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant).
 
 0.990
SHE69230.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 0.989
SHE93077.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
0.984
SHE63361.1
Signal transduction histidine kinase.
  
 0.977
SHE81443.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 
0.969
SHE55347.1
EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant).
 
 
  0.956
SHE36244.1
Hypothetical protein.
   
 0.943
SHE50099.1
Two-component system, chemotaxis family, response regulator CheY.
  
 0.932
SHE47122.1
EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant).
 
 0.931
Your Current Organism:
Ferrithrix thermotolerans
NCBI taxonomy Id: 1121881
Other names: F. thermotolerans DSM 19514, Ferrithrix thermotolerans DSM 19514
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