STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHE90266.1Carboxysome peptide B. (84 aa)    
Predicted Functional Partners:
SHE90212.1
BMC domain-containing protein.
 
 
 
 0.967
SHE90317.1
Carboxysome shell carbonic anhydrase.
 
     0.948
SHE83085.1
BMC domain-containing protein.
 
 
 
 0.920
SHE90335.1
Carboxysome shell peptide mid-region.
 
     0.919
SHE90289.1
Carboxysome peptide A.
 
    
0.796
SHE83065.1
Bacterioferritin.
 
     0.774
SHE90363.1
Ribulose 1,5-bisphosphate carboxylase small subunit.
 
 
 
 0.738
SHE82862.1
Hypothetical protein; Belongs to the UPF0753 family.
  
     0.612
SHE83023.1
Plasmid segregation oscillating ATPase ParF.
  
     0.574
SHE82887.1
NAD(P)H-quinone oxidoreductase subunit 5.
  
     0.502
Your Current Organism:
Ferrithrix thermotolerans
NCBI taxonomy Id: 1121881
Other names: F. thermotolerans DSM 19514, Ferrithrix thermotolerans DSM 19514
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.