STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHE50773.1Hypothetical protein. (345 aa)    
Predicted Functional Partners:
SHE50741.1
Hypothetical protein.
       0.680
SHE75177.1
Glycosyltransferase, GT2 family.
 
  
 0.674
SHF69672.1
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
 
  
 0.631
SHF69712.1
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
  
    0.620
SHF43470.1
Riboflavin kinase / FMN adenylyltransferase; Belongs to the ribF family.
      0.585
SHE50805.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
       0.584
SHE86578.1
dTDP-4-dehydrorhamnose reductase.
  
    0.532
SHF28424.1
Dolichol-phosphate mannosyltransferase.
  
     0.492
SHE67463.1
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
  
 0.486
SHF12591.1
Glycosyltransferase, GT2 family.
  
     0.484
Your Current Organism:
Flavisolibacter ginsengisoli
NCBI taxonomy Id: 1121884
Other names: F. ginsengisoli DSM 18119, Flavisolibacter ginsengisoli DSM 18119
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.