STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHE52920.1Hypothetical protein. (53 aa)    
Predicted Functional Partners:
SHE52957.1
N-acetylglucosaminyl deacetylase, LmbE family.
       0.773
SHE52989.1
Zinc carboxypeptidase.
       0.559
SHE52888.1
Transporter, SSS family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
       0.454
SHE53020.1
Iron complex outermembrane recepter protein.
       0.408
Your Current Organism:
Flavisolibacter ginsengisoli
NCBI taxonomy Id: 1121884
Other names: F. ginsengisoli DSM 18119, Flavisolibacter ginsengisoli DSM 18119
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.